Contributing¶

We welcome you to check the existing issues for bugs or enhancements to work on. If you have an idea for an extension to TPOT, please file a new issue so we can discuss it.

Contribution Guide¶

We welcome you to check the existing issues for bugs or enhancements to work on. If you have an idea for an extension to TPOT, please file a new issue so we can discuss it.

Project layout¶

The latest stable release of TPOT is on the main branch, whereas the latest version of TPOT in development is on the development branch. Make sure you are looking at and working on the correct branch if you're looking to contribute code.

In terms of directory structure:

All of TPOT's code sources are in the tpot directory
The documentation sources are in the docs_sources directory
Images in the documentation are in the images directory
Tutorials for TPOT are in the tutorials directory
Unit tests for TPOT are in the tests.py file

Make sure to familiarize yourself with the project layout before making any major contributions, and especially make sure to send all code changes to the development branch.

How to contribute¶

The preferred way to contribute to TPOT is to fork the main repository on GitHub:

Fork the project repository: click on the 'Fork' button near the top of the page. This creates a copy of the code under your account on the GitHub server.

Clone this copy to your local disk:

  $ git clone git@github.com:YourUsername/tpot2.git
  $ cd tpot

Create a branch to hold your changes:
```
  $ git checkout -b my-contribution
```
Make sure your local environment is setup correctly for development. Installation instructions are almost identical to the user instructions except that TPOT should not be installed. If you have TPOT installed on your computer then make sure you are using a virtual environment that does not have TPOT installed. Furthermore, you should make sure you have installed the pytest package into your development environment so that you can test changes locally.
```
  $ conda install pytest
```
Start making changes on your newly created branch, remembering to never work on the main branch! Work on this copy on your computer using Git to do the version control.
Check your changes haven't broken any existing tests and pass all your new tests. Navigate the terminal into the tpot2/tpot2/ folder and run the command pytest to start all tests. (note, you must have the pytest package installed within your dev environment for this to work):
```
  $ pytest
```
When you're done editing and local testing, run:
```
  $ git add modified_files
  $ git commit
```

to record your changes in Git, then push them to GitHub with:

      $ git push -u origin my-contribution

Finally, go to the web page of your fork of the TPOT repo, and click 'Pull Request' (PR) to send your changes to the maintainers for review. Make sure that you send your PR to the dev branch, as the main branch is reserved for the latest stable release. This will start the CI server to check all the project's unit tests run and send an email to the maintainers.

(If any of the above seems like magic to you, then look up the Git documentation on the web.)

Before submitting your pull request¶

Before you submit a pull request for your contribution, please work through this checklist to make sure that you have done everything necessary so we can efficiently review and accept your changes.

If your contribution changes TPOT in any way:

Update the documentation so all of your changes are reflected there.
Update the README if anything there has changed.

If your contribution involves any code changes:

Update the project unit tests to test your code changes.
Make sure that your code is properly commented with docstrings and comments explaining your rationale behind non-obvious coding practices.

If your contribution requires a new library dependency:

Double-check that the new dependency is easy to install via pip or Anaconda. If the dependency requires a complicated installation, then we most likely won't merge your changes because we want to keep TPOT easy to install.

After submitting your pull request¶

After submitting your pull request, GitHub will automatically run unit tests on your changes and make sure that your updated code builds and runs. We also use services that automatically check code quality and test coverage.

Check back shortly after submitting your pull request to make sure that your code passes these checks. If any of the checks come back with a red X, then do your best to address the errors.